| 2dos |
2-deoxy-streptamine aminoglycoside |
7.0 |
7.0 |
| acyl_amino_acids |
N-acyl amino acid |
4.0 |
4.1 |
| aminocoumarin |
Aminocoumarin |
<= 3.0 |
<= 3.0 |
| aminopolycarboxylic-acid |
Aminopolycarboxylic acid metallophores (doi:10.1039/C8MT00009C) |
7.0 |
7.0 |
| amglyccycl |
Aminoglycoside/aminocyclitol |
<= 3.0 |
<= 3.0 |
| arylpolyene |
Aryl polyene |
<= 3.0 |
<= 3.0 |
| betalactone |
Beta-lactone containing protease inhibitor |
5.0 |
5.0 |
| blactam |
β-lactam |
<= 3.0 |
<= 3.0 |
| bottromycin |
Bottromycin |
<= 3.0 |
<= 3.0 |
| butyrolactone |
Butyrolactone |
<= 3.0 |
<= 3.0 |
| CDPS |
tRNA-dependent cyclodipeptide synthases |
5.0 |
5.0 |
| crocagin |
Crocagin-like |
7.0 |
7.0 |
| cyanobactin |
Cyanobactins like patellamide (AY986476) |
<= 3.0 |
7.0 |
| cyclic-lactone-autoinducer |
agrD-like cyclic lactone autoinducer peptides (AF001782) |
6.0 |
6.0 |
| ectoine |
Ectoine |
<= 3.0 |
<= 3.0 |
| epipeptide |
D-amino-acid containing RiPPs such as yydF (D78193) |
6.0 |
6.0 |
| fatty_acid |
Fatty acid (loose strictness, likely from primary metabolism) |
<= 3.0 |
4.2 |
| furan |
Furan |
<= 3.0 |
5.0 |
| fungal-RiPP |
Fungal RiPP with POP or UstH peptidase types and a modification |
5.0 |
5.0 |
| fungal-RiPP-like |
Fungal RiPP-likes |
7.0 |
7.0 |
| glycocin |
Glycocin |
<= 3.0 |
<= 3.0 |
| guanidinotides |
Pheganomycin-style protein ligase-containing cluster |
4.0 |
6.0 |
| halogenated |
Halogenase-containing cluster, potentially generating a halogenated product |
5.0 |
5.0 |
| hglE-KS |
Heterocyst glycolipid synthase-like PKS |
5.0 |
5.0 |
| hserlactone |
Homoserine lactone |
<= 3.0 |
<= 3.0 |
| indole |
Indole |
<= 3.0 |
4.0 |
| LAP |
Linear azol(in)e-containing peptides |
<= 3.0 |
6.0 |
| ladderane |
Ladderane |
<= 3.0 |
<= 3.0 |
| lanthipeptide class I |
Class I lanthipeptides like nisin |
4.2 |
6.0 |
| lanthipeptide class II |
Class II lanthipeptides like mutacin II (U40620) |
4.2 |
6.0 |
| lanthipeptide class III |
Class III lanthipeptides like labyrinthopeptin (FN178622) |
4.2 |
6.0 |
| lanthipeptide class IV |
Class IV lanthipeptides like venezuelin (HQ328852) |
4.2 |
6.0 |
| lanthipeptide class V |
Glycosylated lanthipeptide/linaridin hybrids like MT210103 |
5.1 |
6.0 |
| lassopeptide |
Lasso peptide |
<= 3.0 |
5.0 |
| linaridin |
Linear arid peptide such as cypemycin (HQ148718) and salinipeptin (MG788286) |
<= 3.0 |
<= 3.0 |
| lipolanthine |
Lanthipeptide class containing N-terminal fatty acids such as MG673929 |
5.0 |
5.0 |
| melanin |
Melanin |
<= 3.0 |
<= 3.0 |
| methanobactin |
Copper-chelating/transporting peptides (doi:10.1126/science.aap9437) |
7.0 |
7.0 |
| microviridin |
Microviridin |
<= 3.0 |
<= 3.0 |
| mycosporine-like |
Molecules containing mycosporine-like amino acid |
7.0 |
7.0 |
| NAGGN |
N-acetylglutaminylglutamine amide |
5.0 |
5.0 |
| NAPAA |
Non-alpha poly-amino acids like e-Polylysin |
6.0 |
7.0 |
| NI-siderophore |
NRPS-independent, IucA/IucC-like siderophores (siderophore prior to 7.0) |
7.0 |
7.0 |
| NRPS |
Non-ribosomal peptide synthetase |
<= 3.0 |
6.0 |
| NRPS-like |
NRPS-like fragment |
5.0 |
5.0 |
| NRP-metallophore |
Non-ribosomal peptide metallophores |
7.0 |
7.0 |
| nucleoside |
Nucleoside |
<= 3.0 |
5.0 |
| oligosaccharide |
Oligosaccharide |
<= 3.0 |
<= 3.0 |
| opine-like-metallophore |
Opine-like zincophores like staphylopine (doi:10.1128/mSystems.00554-20) |
7.0 |
7.0 |
| other |
Cluster containing a secondary metabolite-related protein that does not fit into any other category |
4.0 |
5.0 |
| PBDE |
Polybrominated diphenyl ether |
4.1 |
4.1 |
| phenazine |
Phenazine |
<= 3.0 |
<= 3.0 |
| phosphoglycolipid |
Phosphoglycolipid |
<= 3.0 |
<= 3.0 |
| phosphonate |
Phosphonate |
<= 3.0 |
7.0 |
| phosphonate-like |
Phosphonate-like (prior to 7.0 this was the phosphonate rule) |
7.0 |
7.0 |
| PKS-like |
Other types of PKS |
5.0 |
5.0 |
| PpyS-KS |
PPY-like pyrone |
4.2 |
4.2 |
| prodigiosin |
Serratia-type non-traditional PKS prodigiosin biosynthesis pathway |
6.0 |
6.0 |
| proteusin |
Proteusin |
<= 3.0 |
<= 3.0 |
| PUFA |
Polyunsaturated fatty acid |
<= 3.0 |
<= 3.0 |
| pyrrolidine |
Pyrrolidines like described in BGC0001510 |
6.0 |
6.0 |
| ranthipeptide |
Cys-rich peptides (aka. SCIFF: six Cys in fourty-five) like in CP001581:3481278-3502939 |
6.0 |
6.0 |
| RaS-RiPP |
Streptide-like thioether-bond RiPPs |
5.0 |
5.0 |
| RCDPS |
Fungal Arginine-containing cyclic dipeptides |
7.0 |
7.0 |
| redox-cofactor |
Redox-cofactors such as PQQ (NC_021985:1458906-1494876) |
6.0 |
6.0 |
| resorcinol |
Resorcinol |
<= 3.0 |
<= 3.0 |
| RiPP-like |
Other unspecified ribosomally synthesised and post-translationally modified peptide product (RiPP) |
4.1 |
7.0 |
| RRE-containing |
RRE-element containing cluster |
6.0 |
6.0 |
| saccharide |
Saccharide (loose strictness, likely from primary metabolism) |
<= 3.0 |
<= 3.0 |
| sactipeptide |
Sactipeptide |
<= 3.0 |
6.0 |
| spliceotide |
RiPPs containing plpX type spliceases (NZ_KB235920:17899-42115) |
6.0 |
6.0 |
| T1PKS |
Type I PKS (Polyketide synthase) |
<= 3.0 |
<= 3.0 |
| T2PKS |
Type II PKS |
<= 3.0 |
5.0 |
| T3PKS |
Type III PKS |
<= 3.0 |
<= 3.0 |
| terpene |
Terpene |
<= 3.0 |
4.1 |
| thioamitides |
Thioamitide RiPPs as found in JOBF01000011 |
5.1 |
6.0 |
| thioamide-NRP |
Thioamide-containing non-ribosomal peptide |
5.0 |
5.0 |
| thiopeptide |
Thiopeptide |
4.2 |
5.0 |
| transAT-PKS |
Trans-AT PKS |
<= 3.0 |
5.0 |
| transAT-PKS-like |
Trans-AT PKS fragment, with trans-AT domain not found |
<= 5.0 |
5.0 |
| tropodithietic-acid |
Tropodithietic acid |
5.0 |
5.0 |