2dos |
2-deoxy-streptamine aminoglycoside |
7.0 |
7.0 |
acyl_amino_acids |
N-acyl amino acid |
4.0 |
4.1 |
aminocoumarin |
Aminocoumarin |
<= 3.0 |
<= 3.0 |
aminopolycarboxylic-acid |
Aminopolycarboxylic acid metallophores (doi:10.1039/C8MT00009C) |
7.0 |
7.0 |
amglyccycl |
Aminoglycoside/aminocyclitol |
<= 3.0 |
<= 3.0 |
arylpolyene |
Aryl polyene |
<= 3.0 |
<= 3.0 |
betalactone |
Beta-lactone containing protease inhibitor |
5.0 |
5.0 |
blactam |
β-lactam |
<= 3.0 |
<= 3.0 |
bottromycin |
Bottromycin |
<= 3.0 |
<= 3.0 |
butyrolactone |
Butyrolactone |
<= 3.0 |
<= 3.0 |
CDPS |
tRNA-dependent cyclodipeptide synthases |
5.0 |
5.0 |
crocagin |
Crocagin-like |
7.0 |
7.0 |
cyanobactin |
Cyanobactins like patellamide (AY986476) |
<= 3.0 |
7.0 |
cyclic-lactone-autoinducer |
agrD-like cyclic lactone autoinducer peptides (AF001782) |
6.0 |
6.0 |
ectoine |
Ectoine |
<= 3.0 |
<= 3.0 |
epipeptide |
D-amino-acid containing RiPPs such as yydF (D78193) |
6.0 |
6.0 |
fatty_acid |
Fatty acid (loose strictness, likely from primary metabolism) |
<= 3.0 |
4.2 |
furan |
Furan |
<= 3.0 |
5.0 |
fungal-RiPP |
Fungal RiPP with POP or UstH peptidase types and a modification |
5.0 |
5.0 |
fungal-RiPP-like |
Fungal RiPP-likes |
7.0 |
7.0 |
glycocin |
Glycocin |
<= 3.0 |
<= 3.0 |
guanidinotides |
Pheganomycin-style protein ligase-containing cluster |
4.0 |
6.0 |
halogenated |
Halogenase-containing cluster, potentially generating a halogenated product |
5.0 |
5.0 |
hglE-KS |
Heterocyst glycolipid synthase-like PKS |
5.0 |
5.0 |
hserlactone |
Homoserine lactone |
<= 3.0 |
<= 3.0 |
indole |
Indole |
<= 3.0 |
4.0 |
LAP |
Linear azol(in)e-containing peptides |
<= 3.0 |
6.0 |
ladderane |
Ladderane |
<= 3.0 |
<= 3.0 |
lanthipeptide class I |
Class I lanthipeptides like nisin |
4.2 |
6.0 |
lanthipeptide class II |
Class II lanthipeptides like mutacin II (U40620) |
4.2 |
6.0 |
lanthipeptide class III |
Class III lanthipeptides like labyrinthopeptin (FN178622) |
4.2 |
6.0 |
lanthipeptide class IV |
Class IV lanthipeptides like venezuelin (HQ328852) |
4.2 |
6.0 |
lanthipeptide class V |
Glycosylated lanthipeptide/linaridin hybrids like MT210103 |
5.1 |
6.0 |
lassopeptide |
Lasso peptide |
<= 3.0 |
5.0 |
linaridin |
Linear arid peptide such as cypemycin (HQ148718) and salinipeptin (MG788286) |
<= 3.0 |
<= 3.0 |
lipolanthine |
Lanthipeptide class containing N-terminal fatty acids such as MG673929 |
5.0 |
5.0 |
melanin |
Melanin |
<= 3.0 |
<= 3.0 |
methanobactin |
Copper-chelating/transporting peptides (doi:10.1126/science.aap9437) |
7.0 |
7.0 |
microviridin |
Microviridin |
<= 3.0 |
<= 3.0 |
mycosporine-like |
Molecules containing mycosporine-like amino acid |
7.0 |
7.0 |
NAGGN |
N-acetylglutaminylglutamine amide |
5.0 |
5.0 |
NAPAA |
Non-alpha poly-amino acids like e-Polylysin |
6.0 |
7.0 |
NI-siderophore |
NRPS-independent, IucA/IucC-like siderophores (siderophore prior to 7.0) |
7.0 |
7.0 |
NRPS |
Non-ribosomal peptide synthetase |
<= 3.0 |
6.0 |
NRPS-like |
NRPS-like fragment |
5.0 |
5.0 |
NRP-metallophore |
Non-ribosomal peptide metallophores |
7.0 |
7.0 |
nucleoside |
Nucleoside |
<= 3.0 |
5.0 |
oligosaccharide |
Oligosaccharide |
<= 3.0 |
<= 3.0 |
opine-like-metallophore |
Opine-like zincophores like staphylopine (doi:10.1128/mSystems.00554-20) |
7.0 |
7.0 |
other |
Cluster containing a secondary metabolite-related protein that does not fit into any other category |
4.0 |
5.0 |
PBDE |
Polybrominated diphenyl ether |
4.1 |
4.1 |
phenazine |
Phenazine |
<= 3.0 |
<= 3.0 |
phosphoglycolipid |
Phosphoglycolipid |
<= 3.0 |
<= 3.0 |
phosphonate |
Phosphonate |
<= 3.0 |
7.0 |
phosphonate-like |
Phosphonate-like (prior to 7.0 this was the phosphonate rule) |
7.0 |
7.0 |
PKS-like |
Other types of PKS |
5.0 |
5.0 |
PpyS-KS |
PPY-like pyrone |
4.2 |
4.2 |
prodigiosin |
Serratia-type non-traditional PKS prodigiosin biosynthesis pathway |
6.0 |
6.0 |
proteusin |
Proteusin |
<= 3.0 |
<= 3.0 |
PUFA |
Polyunsaturated fatty acid |
<= 3.0 |
<= 3.0 |
pyrrolidine |
Pyrrolidines like described in BGC0001510 |
6.0 |
6.0 |
ranthipeptide |
Cys-rich peptides (aka. SCIFF: six Cys in fourty-five) like in CP001581:3481278-3502939 |
6.0 |
6.0 |
RaS-RiPP |
Streptide-like thioether-bond RiPPs |
5.0 |
5.0 |
RCDPS |
Fungal Arginine-containing cyclic dipeptides |
7.0 |
7.0 |
redox-cofactor |
Redox-cofactors such as PQQ (NC_021985:1458906-1494876) |
6.0 |
6.0 |
resorcinol |
Resorcinol |
<= 3.0 |
<= 3.0 |
RiPP-like |
Other unspecified ribosomally synthesised and post-translationally modified peptide product (RiPP) |
4.1 |
7.0 |
RRE-containing |
RRE-element containing cluster |
6.0 |
6.0 |
saccharide |
Saccharide (loose strictness, likely from primary metabolism) |
<= 3.0 |
<= 3.0 |
sactipeptide |
Sactipeptide |
<= 3.0 |
6.0 |
spliceotide |
RiPPs containing plpX type spliceases (NZ_KB235920:17899-42115) |
6.0 |
6.0 |
T1PKS |
Type I PKS (Polyketide synthase) |
<= 3.0 |
<= 3.0 |
T2PKS |
Type II PKS |
<= 3.0 |
5.0 |
T3PKS |
Type III PKS |
<= 3.0 |
<= 3.0 |
terpene |
Terpene |
<= 3.0 |
4.1 |
thioamitides |
Thioamitide RiPPs as found in JOBF01000011 |
5.1 |
6.0 |
thioamide-NRP |
Thioamide-containing non-ribosomal peptide |
5.0 |
5.0 |
thiopeptide |
Thiopeptide |
4.2 |
5.0 |
transAT-PKS |
Trans-AT PKS |
<= 3.0 |
5.0 |
transAT-PKS-like |
Trans-AT PKS fragment, with trans-AT domain not found |
<= 5.0 |
5.0 |
tropodithietic-acid |
Tropodithietic acid |
5.0 |
5.0 |