Glossary of PKS type II specific terms

CLF
chain length factor
CLF_7
extending by 7 units
CLF_8|9
extending by 8 or 9 units
CLF_11|12
extending by 11 or 12 units
AT
acetyl transferase
CYC
cyclase
CYC_C7-C12
connecting carbons 7 and 12
CYC_C5-C14
connecting carbons 5 and 14
CYC_C5-C14/C3-C16
connecting carbons 5 or 3 and 14 or 16, respectively
CYC_C1-C18|C2-C19
connecting carbons 1 or 2 and 18 or 19, respectively
CYC_C2-C19
connecting carbons 2 and 19
CYC_C5-C18
connecting carbons 5 and 18
CYC_C4-C17/C2-C19
connecting carbons 4 or 2 and 17 or 19, respectively
CYC_C4-C21/C2-C23|C2-C19
connecting carbons 4 or 2 and 21, 23, or 19, respectively
CYC_C9-C14
connecting carbons 9 and 14
KSIII
Non-acetate starter unit ketosynthase III
ACP
acetyl carrier proteing
KR
ketoreductase
KR_C9
reducing carbon 9
KR_C11
reducing carbon 11
KR_C15
reducing carbon 15
KR_C17
reducing carbon 17
KR_C19
reducing carbon 19
KS
ketosynthase
OXY
oxygenase
GT
glycosyltransferase
MET
methyltransferase
MET_carboxy_O
carboxyl O-methyltransferase
MET_C2O|C2N
O- or N-methyltransferase acting on the oxygen or nitrogen at carbon 2, respectively
MET_C6|C8
methyltransferase acting at carbon 6 or 8
MET_C9O
O-methyltransferase acting on the oxygen at carbon 9
MET_C10
methyltransferase acting at carbon 10
MET_C11O
O-methyltransferase acting on the oxygen at carbon 11
MET_C13O|C17O
O-methyltransferase acting on the oxygen at carbon 13 or 17
MET_C18O
O-methyltransferase acting on the oxygen at carbon 18
DIMER
dimerase
LIG
ligase
HAL
halogenase
AMIN
aminase
AMID
amidase